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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795243.1_cds_XP_016443135.1_3752
CDS Infomation

[gene=LOC107768508] [db_xref=GeneID:107768508] [protein=vacuolar amino acid transporter 1-like] [protein_id=XP_016443135.1] [location=complement(join(46331..46423,47299..47361,47472..47515,47818..47963,48289..48308,48392..48527,48927..49146,49277..49457,49567..49590,49879..50093,50181..50500,51493..51701))] [gbkey=CDS]
Sequence

ATGAAGAATTCTGTCTCTGAACACAGTTTCTACATAGAGAGCGACGACGAGGATGATCAT
GGGGAGGAGAAACAATTGGATAAACCTGAAAATGAAGATGGTAATGACTCTGATTCTTCC
AATTACTCTAATGATGATAATAATGAAAACGATTTCCCGGACAGCAAACCGAGTTCCTTC
AACCCTCCTGCTTGGCCTCAAAGTTACAGGCAATCTATGGATATATATAGTAGTGTACCG
TCTCCAAGTCTTACTTTCCTGGGGACGCCTTCATTAACACGTTTAGGCAGCTCGTTCCTT
GCCTCATCACTCACAAGGAGACACACTCCTGAAGTGTTACCCTCTCTTCATAAACCTCTC
ATACCGCAAGCAGAAGAGGAGCAACCCCAACAGCGGCGTAGCTCTCATACTTTGCTGCCT
CCTCTTCCATCAAGGAGGTCTGCTATTAAGAAATTTCCTGATGAGAAATCAGTTGCACAT
GAATTTCCAGCTTCCCGTCAAAGTTCCTACGGCCAAGGCGTGCTAAACGGTATTAATGTT
CTATGTGGAGTAGGAATCCTTTCTACTCCTTATGCTGTGAAGGAAGGTGGATGGGCAGGG
CTTTCTATATTATTCATCTTCGGTGTGCTTTCTTACTATACTGGCATTCTCCTTAGATAC
TGCTTGGACAGCCAACCGGGGCTCGAGACTTACCCGGATATTGGTCAGGCAGCCTTTGGT
ACAGTGGGAAGAATTATCATATCGATAATATTATACGTGGAATTATATTCCTGTTGTGTT
GAATACATAATTTTGGAGGGAGATAACCTGTCGGCTTTATTTCCAAATGCACATTTAAGT
TTGGGAGGGTACCAATTAGATGCACGGCATCTCTTTGCTTTGATAACCACCTTAGCTGTT
CTTCCTACCGTTTGGTTGCGTGACCTTACTGTTCTTAGTTACATCTCAGCTGGAGGAGTT
ATTGCTTCTGTAATGGTCGTCGTTTGCTTGTACTGGCTCGGCTTAGTGGATCATGTTAGC
TCTCAAAGCGAACAAACTGTACTGAACGTTTCTAGTCTCCCTGTTGCTATTGGACTTTAT
GGATATTGTTACTCCGGGCATGCAGTGTTTCCTAATATATATACATCACTGGAGAAACGC
AGTCAATTCCCTGCCGTCCTCTTAACCAGTTTCGCTATTGTGACTGTATTGTATGCTGGA
GCAGCTGTGATGGGATACATGATGTTTGGGGACTCGGCTGAATCCCAGTTTACTCTAAAC
TTGCCCACAGATTTAGTTGCCTCCAAAATTGCTTTTTGGACAACCATTGTTAATCCATTC
ACAAAATATGCTTTAACCATGTCCCCTGTTGCTATGAGTATGGAGGAGTTGATACCATCG
AACCACGCCAAATCTCACATGTACGGAGTCCTCATTAGAACTGCACTGGTGATATCCACA
TTACTTGTGGCGCTTAAAGTTCCTTTTTTTGGATTTGTGATGGCATTGATTGGATCATTA
TTTACAATGCTAGTTACATTGATCCTACCTTGTGCTTGCTTCTTGAGAATATTGAAAGGA
AAAACAAGTCCAATTCAGGTATCAGCATGTATACTTATTATCATAATTGGTGCTATATCA
GCAGTTATTGGATCTTATTCAGCTCTCTCCAAAATCATCCAGAGTTTATGA

Peptide Sequence

PEP ID

XP_016443135.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tabacum]
Sequence

MKNSVSEHSFYIESDDEDDHGEEKQLDKPENEDGNDSDSSNYSNDDNNENDFPDSKPSSF
NPPAWPQSYRQSMDIYSSVPSPSLTFLGTPSLTRLGSSFLASSLTRRHTPEVLPSLHKPL
IPQAEEEQPQQRRSSHTLLPPLPSRRSAIKKFPDEKSVAHEFPASRQSSYGQGVLNGINV
LCGVGILSTPYAVKEGGWAGLSILFIFGVLSYYTGILLRYCLDSQPGLETYPDIGQAAFG
TVGRIIISIILYVELYSCCVEYIILEGDNLSALFPNAHLSLGGYQLDARHLFALITTLAV
LPTVWLRDLTVLSYISAGGVIASVMVVVCLYWLGLVDHVSSQSEQTVLNVSSLPVAIGLY
GYCYSGHAVFPNIYTSLEKRSQFPAVLLTSFAIVTVLYAGAAVMGYMMFGDSAESQFTLN
LPTDLVASKIAFWTTIVNPFTKYALTMSPVAMSMEELIPSNHAKSHMYGVLIRTALVIST
LLVALKVPFFGFVMALIGSLFTMLVTLILPCACFLRILKGKTSPIQVSACILIIIIGAIS
AVIGSYSALSKIIQSL

Transcript Sequence

Gene sequence data has not been registered.